Resources AEC 450 2019-05-13T12:57:48+00:00

Conservation Genetics – AEC 450

Lecture
Tuesday 11:45 to 1:00 pm, DCL 139

Syllabus Spring 2018

Revised Spring Syllabus 2018

Personal Information Form to fill out

Syllabus Handouts

  • 1 – Information on the Proposal Project
  • 2 – How to write up and present a Research Proposal Project (3a and 3b)
  • 3 – Writing Proposal Guidelines 

Syllabus Readings

(note this doesn’t include readings for the Case Studies)

Case Studies

  • Case Study I: Information and WhaleConGenPaper, MexicanWolfStudy, Optional_FollowupWhaleConGen
  • Case Study II: Information 
  • Case Study III: Information
  • Case Study IV: Information

Problem Sets

  • Problem Set I and Key
  • Problem Set 2 and Key
  • Problem Set 3 and Key
  • Problem Set 4  and Key

Midterm

  • Take home midterm and Key

Lecture Resources

  • Slides Lecture 1 Introduction to Variation
  • Slides for Lecture 2 HWE and Genetic Variation and Lecture 2 notes
  • Slides for Lecture 3A Genetic Drift ; Slides for Lecture 3B Genetic Drift & Ne; and Lecture 3A&B Notes
  • Slides for Lecture 4 Natural Selection and Lecture 4 Notes
  • Slides for Lecture 5A Population Subdivision P1 and Lecture 5A Notes 
  • Slides for Lecture 5B Population Subdivision P2 and Lecture 5B Notes
  • Slides for Lecture 6A Multiple Loci and Lecture 6A Notes
  • Slides for Lecture 6B QTL and Lecture Notes QTL  
  • Slides for Lecture 7  and Lecture 7 Notes Inbreeding  
  • Slides for Lecture 8A Demography
  • Slides for Lecture 8B Metapopulation&Fragmentation&LandscapeGenetics
  • Slides for Lecture 9 Hybrids
  • Slides for Lecture 10 Invasive Species
  • Slides for Lecture 11 Population Genetic Toolkit and Lecture 11 Notes 
  • Slides for Lecture 12 Population Genomic Toolkit
  • Slides for Research Proposal Project

Microsatellite Lab 

  • Information slides
  • Microsatellite Lab & writeup, Microsatellite Lab Key
  • Background reading- Burford 2009
  • Structure Manual PDF

Wet Labs

  • DNA extraction lab
  • Genomic library building wetlab

Flounder Genomic Project

  • Information slides on the flounder project
  • Bioinformatic Lab Slides DAY 1
  • Bioinformatic Lab Slides DAY 2
  • Flounder popgen background paper – Wang Et Al_2015
  • Flounder Bioinformatic Pipeline Lab, Flounder Bioinformatic Pipeline Lab KEY
  • Background reading on ddRADseq- Burford Reiskind et al. 2016
  • Library building protocol

Research Proposal

  • TBA

Conservation Genetic Papers

Links

NC State Branding Bar